PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011075715.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family GeBP
Protein Properties Length: 300aa    MW: 34546.4 Da    PI: 5.1922
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011075715.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57369.85.7e-2285177397
          DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiW 96 
                     f++++seeDei+lL+Gl  f a+      + +++fy+f+k++++ +++++q++e irrLK Kf+++ kk +++g+  ++  +h++ +f++sk +W
  XP_011075715.1  85 FSKIFSEEDEIALLKGLAVFWADGR---NNKWTEFYNFIKDNLQHQFTRTQVSEEIRRLKGKFENNFKKaRANGDWLDLLDAHESAVFDVSKTLW 176
                     899*****************77755...469***********************************9997889999******************* PP

          DUF573  97 g 97 
                     g
  XP_011075715.1 177 G 177
                     8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.6E-2085177IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MRPQRLSFSG DGEGEDEEDK QQTTHEADEE TDSDSDSKSE EEESTAAVPP KKTKLNPPRE  60
EEGPVSGKEE SECSAAKPSV KNTPFSKIFS EEDEIALLKG LAVFWADGRN NKWTEFYNFI  120
KDNLQHQFTR TQVSEEIRRL KGKFENNFKK ARANGDWLDL LDAHESAVFD VSKTLWGEDK  180
CEAGDKHAEK EKETPQKGDR SRFQKKRKRA GKEHDADKEI MKNQKKTGKI DKEEFASAYP  240
LVALSLNENG YPNFIKEKFL LIGREKLQEL EEKWRDVKAA ELSLELKRID LIRRDLHNLL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011102040.10.0PREDICTED: mediator-associated protein 1-like
RefseqXP_011075718.10.0PREDICTED: mediator-associated protein 1-like
RefseqXP_011075715.10.0PREDICTED: mediator-associated protein 1-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13664413
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.11e-11DNA-binding storekeeper protein-related transcriptional regulator